Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ATL3Q6DD88 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATL3Q6DD88 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATL3Q6DD88 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ATL3Q6DD88 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.93■□□□□ 0.78
ATL3Q6DD88 KRT8P10-201ENST00000450021 1447 ntBASIC19.93■□□□□ 0.78
ATL3Q6DD88 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 AC211429.1-201ENST00000415277 523 ntBASIC19.92■□□□□ 0.78
ATL3Q6DD88 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 AC022616.7-201ENST00000525383 220 ntBASIC19.92■□□□□ 0.78
ATL3Q6DD88 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.92■□□□□ 0.78
ATL3Q6DD88 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATL3Q6DD88 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 AC011498.5-201ENST00000592027 486 ntBASIC19.91■□□□□ 0.78
ATL3Q6DD88 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATL3Q6DD88 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATL3Q6DD88 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 KRT8P26-201ENST00000534154 1276 ntBASIC19.9■□□□□ 0.78
ATL3Q6DD88 AC009533.2-201ENST00000543664 586 ntBASIC19.9■□□□□ 0.78
ATL3Q6DD88 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 AL136038.3-201ENST00000561909 1096 ntBASIC19.9■□□□□ 0.78
ATL3Q6DD88 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATL3Q6DD88 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL3Q6DD88 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms