Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 AC138894.3-201ENST00000603787 634 ntBASIC15.29■□□□□ 0.04
FAM27BQ5VT28 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.29■□□□□ 0.04
FAM27BQ5VT28 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM27BQ5VT28 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 FOSL1P1-201ENST00000511041 816 ntBASIC15.28■□□□□ 0.04
FAM27BQ5VT28 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.28■□□□□ 0.04
FAM27BQ5VT28 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 AP001094.4-201ENST00000579008 2176 ntBASIC15.28■□□□□ 0.04
FAM27BQ5VT28 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM27BQ5VT28 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 AL020989.1-201ENST00000422979 469 ntBASIC15.27■□□□□ 0.04
FAM27BQ5VT28 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 AL121772.3-201ENST00000610840 674 ntBASIC15.27■□□□□ 0.04
FAM27BQ5VT28 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.27■□□□□ 0.04
FAM27BQ5VT28 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
FAM27BQ5VT28 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FAM27BQ5VT28 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM27BQ5VT28 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FAM27BQ5VT28 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.26■□□□□ 0.03
FAM27BQ5VT28 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms