Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 AC092053.1-201ENST00000605787 1936 ntBASIC16.53■□□□□ 0.24
RUNDC3AQ59EK9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 COX5BP2-201ENST00000392354 334 ntBASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 STARP1-201ENST00000397973 869 ntBASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 AP003733.1-201ENST00000491725 852 ntBASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RUNDC3AQ59EK9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RUNDC3AQ59EK9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 FAM8A6P-201ENST00000407496 1135 ntBASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 AC092597.1-201ENST00000487352 616 ntBASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 COX11P1-201ENST00000489116 835 ntBASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 AC066615.1-201ENST00000640911 628 ntBASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 AC010460.3-201ENST00000511359 1579 ntBASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 AC018695.7-201ENST00000624587 2492 ntBASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RUNDC3AQ59EK9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 AC008894.3-201ENST00000624324 3103 ntBASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RUNDC3AQ59EK9 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms