Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC8.83□□□□□ -1
LINC01554Q52M75 AC016769.1-201ENST00000409132 1010 ntBASIC8.83□□□□□ -1
LINC01554Q52M75 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 SPI1-203ENST00000533030 661 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC8.83□□□□□ -1
LINC01554Q52M75 MFSD11-216ENST00000590393 1141 ntBASIC8.83□□□□□ -1
LINC01554Q52M75 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC8.83□□□□□ -1
LINC01554Q52M75 AC022188.1-201ENST00000620960 1664 ntBASIC8.83□□□□□ -1
LINC01554Q52M75 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 AC007191.1-201ENST00000623179 2995 ntBASIC8.83□□□□□ -1
LINC01554Q52M75 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC8.83□□□□□ -1
LINC01554Q52M75 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 PHGDH-210ENST00000641115 1638 ntBASIC8.83□□□□□ -1
LINC01554Q52M75 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
LINC01554Q52M75 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
LINC01554Q52M75 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC8.83□□□□□ -1
LINC01554Q52M75 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC8.82□□□□□ -1
LINC01554Q52M75 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC8.82□□□□□ -1
LINC01554Q52M75 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 AL603756.1-201ENST00000606511 2163 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 AC092053.1-201ENST00000605787 1936 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 PCDHA3-202ENST00000532566 4594 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 MCRIP2P1-201ENST00000394346 511 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC8.82□□□□□ -1
LINC01554Q52M75 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 GXYLT1P2-201ENST00000433312 1230 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC8.82□□□□□ -1
LINC01554Q52M75 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 AC137761.2-201ENST00000561729 223 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 AC145350.3-201ENST00000569033 163 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC8.82□□□□□ -1
LINC01554Q52M75 AC016405.3-201ENST00000607710 860 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 AC013268.1-206ENST00000638368 961 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 AC112229.1-201ENST00000639295 961 ntBASIC8.82□□□□□ -1
LINC01554Q52M75 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
LINC01554Q52M75 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC8.82□□□□□ -1
LINC01554Q52M75 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
LINC01554Q52M75 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms