Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.36■□□□□ 0.85
CERKLQ49MI3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.36■□□□□ 0.85
CERKLQ49MI3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CERKLQ49MI3 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 AC096734.2-201ENST00000562054 433 ntBASIC20.36■□□□□ 0.85
CERKLQ49MI3 AP001160.2-201ENST00000596071 487 ntBASIC20.36■□□□□ 0.85
CERKLQ49MI3 AC010507.1-201ENST00000633895 436 ntBASIC20.36■□□□□ 0.85
CERKLQ49MI3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 AC006116.8-202ENST00000587620 1550 ntBASIC20.36■□□□□ 0.85
CERKLQ49MI3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.36■□□□□ 0.85
CERKLQ49MI3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.36■□□□□ 0.85
CERKLQ49MI3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.36■□□□□ 0.85
CERKLQ49MI3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CERKLQ49MI3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CERKLQ49MI3 AC012317.2-201ENST00000623305 2251 ntBASIC20.36■□□□□ 0.85
CERKLQ49MI3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 AC005829.1-201ENST00000570002 483 ntBASIC20.35■□□□□ 0.85
CERKLQ49MI3 AC004877.2-201ENST00000623941 599 ntBASIC20.35■□□□□ 0.85
CERKLQ49MI3 AC079781.4-201ENST00000641908 219 ntBASIC20.35■□□□□ 0.85
CERKLQ49MI3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.35■□□□□ 0.85
CERKLQ49MI3 LINC00304-203ENST00000565008 1864 ntBASIC20.35■□□□□ 0.85
CERKLQ49MI3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CERKLQ49MI3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 AC211486.1-202ENST00000416371 468 ntBASIC20.34■□□□□ 0.85
CERKLQ49MI3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 AC211476.1-201ENST00000503899 468 ntBASIC20.34■□□□□ 0.85
CERKLQ49MI3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CERKLQ49MI3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
CERKLQ49MI3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.33■□□□□ 0.85
CERKLQ49MI3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CERKLQ49MI3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms