Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ANKRD55Q3KP44 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 LINC02012-201ENST00000608206 1725 ntBASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 AC092053.1-201ENST00000605787 1936 ntBASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 FER1L4-210ENST00000615531 5998 ntBASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ANKRD55Q3KP44 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 LINC01311-201ENST00000565162 1445 ntBASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 KRT8P47-201ENST00000604727 1398 ntBASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 NUDT16P1-203ENST00000513809 620 ntBASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 AC092068.3-201ENST00000587894 2016 ntBASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ANKRD55Q3KP44 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms