Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 AC098818.2-201ENST00000564925 2320 ntBASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 AL513480.1-201ENST00000451731 511 ntBASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 SPCS2P1-201ENST00000561636 679 ntBASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.93■□□□□ 0.62
TRIM71Q2Q1W2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AC093520.2-201ENST00000561830 333 ntBASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AC092364.2-202ENST00000597012 1073 ntBASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AL139327.4-201ENST00000612362 153 ntBASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM71Q2Q1W2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 TNXA-203ENST00000507684 2038 ntBASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 AC099522.2-201ENST00000607001 744 ntBASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM71Q2Q1W2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms