Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 AC006557.2-201ENST00000592985 1240 ntBASIC21.04■□□□□ 0.96
RFX7Q2KHR2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.04■□□□□ 0.96
RFX7Q2KHR2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 MIR940-201ENST00000401276 94 ntBASIC21.03■□□□□ 0.96
RFX7Q2KHR2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 AC139713.2-201ENST00000641328 2723 ntBASIC21.03■□□□□ 0.96
RFX7Q2KHR2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC21.03■□□□□ 0.96
RFX7Q2KHR2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 AC141586.5-201ENST00000624546 2050 ntBASIC21.02■□□□□ 0.96
RFX7Q2KHR2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 ACTG1P4-201ENST00000425123 1122 ntBASIC21.02■□□□□ 0.96
RFX7Q2KHR2 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 AL135999.2-201ENST00000622438 1686 ntBASIC21.02■□□□□ 0.96
RFX7Q2KHR2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RFX7Q2KHR2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.01■□□□□ 0.95
RFX7Q2KHR2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.01■□□□□ 0.95
RFX7Q2KHR2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.01■□□□□ 0.95
RFX7Q2KHR2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21■□□□□ 0.95
RFX7Q2KHR2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 SIGLEC30P-201ENST00000455569 941 ntBASIC21■□□□□ 0.95
RFX7Q2KHR2 AC136632.2-201ENST00000512891 861 ntBASIC21■□□□□ 0.95
RFX7Q2KHR2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21■□□□□ 0.95
RFX7Q2KHR2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21■□□□□ 0.95
RFX7Q2KHR2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21■□□□□ 0.95
RFX7Q2KHR2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 AL589182.2-201ENST00000619332 1049 ntBASIC21■□□□□ 0.95
RFX7Q2KHR2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC21■□□□□ 0.95
RFX7Q2KHR2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21■□□□□ 0.95
RFX7Q2KHR2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RFX7Q2KHR2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms