Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CBX1P83916 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CBX1P83916 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.27■□□□□ 0.52
CBX1P83916 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CBX1P83916 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX1P83916 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 AC022532.1-201ENST00000624563 1728 ntBASIC18.27■□□□□ 0.52
CBX1P83916 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.27■□□□□ 0.52
CBX1P83916 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX1P83916 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX1P83916 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX1P83916 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CBX1P83916 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CBX1P83916 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.27■□□□□ 0.52
CBX1P83916 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CBX1P83916 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
CBX1P83916 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CBX1P83916 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CBX1P83916 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.27■□□□□ 0.51
CBX1P83916 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
CBX1P83916 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CBX1P83916 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CBX1P83916 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 AC068587.6-202ENST00000641839 5619 ntBASIC18.26■□□□□ 0.51
CBX1P83916 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.26■□□□□ 0.51
CBX1P83916 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.26■□□□□ 0.51
CBX1P83916 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CBX1P83916 AL031432.3-201ENST00000607698 485 ntBASIC18.26■□□□□ 0.51
CBX1P83916 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.26■□□□□ 0.51
CBX1P83916 AP006587.1-201ENST00000534129 1502 ntBASIC18.26■□□□□ 0.51
CBX1P83916 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC18.26■□□□□ 0.51
CBX1P83916 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.26■□□□□ 0.51
CBX1P83916 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CBX1P83916 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CBX1P83916 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.26■□□□□ 0.51
CBX1P83916 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.26■□□□□ 0.51
CBX1P83916 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CBX1P83916 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CBX1P83916 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.25■□□□□ 0.51
CBX1P83916 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.25■□□□□ 0.51
CBX1P83916 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.25■□□□□ 0.51
CBX1P83916 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.25■□□□□ 0.51
CBX1P83916 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.25■□□□□ 0.51
CBX1P83916 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CBX1P83916 LINC02228-203ENST00000641970 1355 ntBASIC18.25■□□□□ 0.51
CBX1P83916 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CBX1P83916 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CBX1P83916 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.25■□□□□ 0.51
CBX1P83916 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CBX1P83916 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.25■□□□□ 0.51
CBX1P83916 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CBX1P83916 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.24■□□□□ 0.51
CBX1P83916 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CBX1P83916 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CBX1P83916 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CBX1P83916 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms