Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AL078644.1-201ENST00000609881 752 ntBASIC20.3■□□□□ 0.84
IRX3P78415 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.3■□□□□ 0.84
IRX3P78415 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
IRX3P78415 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.3■□□□□ 0.84
IRX3P78415 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
IRX3P78415 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IRX3P78415 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
IRX3P78415 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.29■□□□□ 0.84
IRX3P78415 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.29■□□□□ 0.84
IRX3P78415 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.29■□□□□ 0.84
IRX3P78415 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
IRX3P78415 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 STK19B-204ENST00000512515 211 ntBASIC20.29■□□□□ 0.84
IRX3P78415 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.29■□□□□ 0.84
IRX3P78415 AL805961.1-202ENST00000641562 540 ntBASIC20.29■□□□□ 0.84
IRX3P78415 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
IRX3P78415 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 GPR89P-201ENST00000407924 1495 ntBASIC20.29■□□□□ 0.84
IRX3P78415 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.29■□□□□ 0.84
IRX3P78415 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.29■□□□□ 0.84
IRX3P78415 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IRX3P78415 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
IRX3P78415 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
IRX3P78415 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
IRX3P78415 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 MRPL20P1-201ENST00000400819 433 ntBASIC20.28■□□□□ 0.84
IRX3P78415 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.28■□□□□ 0.84
IRX3P78415 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.28■□□□□ 0.84
IRX3P78415 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.28■□□□□ 0.84
IRX3P78415 IGHV3-52-201ENST00000519770 353 ntBASIC20.28■□□□□ 0.84
IRX3P78415 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.28■□□□□ 0.84
IRX3P78415 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.28■□□□□ 0.84
IRX3P78415 AC010654.1-201ENST00000615722 808 ntBASIC20.28■□□□□ 0.84
IRX3P78415 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
IRX3P78415 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
IRX3P78415 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.28■□□□□ 0.84
IRX3P78415 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.28■□□□□ 0.84
IRX3P78415 AC008894.3-201ENST00000624324 3103 ntBASIC20.28■□□□□ 0.84
IRX3P78415 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IRX3P78415 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 BX276092.7-203ENST00000637198 1536 ntBASIC20.27■□□□□ 0.84
IRX3P78415 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.27■□□□□ 0.84
IRX3P78415 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
IRX3P78415 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.27■□□□□ 0.84
IRX3P78415 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.27■□□□□ 0.84
IRX3P78415 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.27■□□□□ 0.84
IRX3P78415 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IRX3P78415 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.27■□□□□ 0.84
IRX3P78415 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
IRX3P78415 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
IRX3P78415 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
IRX3P78415 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IRX3P78415 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.83
IRX3P78415 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IRX3P78415 MST1L-201ENST00000442552 2185 ntBASIC20.27■□□□□ 0.83
IRX3P78415 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms