Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 AC004461.1-201ENST00000412461 403 ntBASIC16.55■□□□□ 0.24
GABREP78334 AC244107.1-201ENST00000442033 332 ntBASIC16.55■□□□□ 0.24
GABREP78334 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.55■□□□□ 0.24
GABREP78334 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.55■□□□□ 0.24
GABREP78334 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.55■□□□□ 0.24
GABREP78334 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.55■□□□□ 0.24
GABREP78334 AC025678.2-201ENST00000562061 970 ntBASIC16.55■□□□□ 0.24
GABREP78334 STK25P1-201ENST00000585406 838 ntBASIC16.55■□□□□ 0.24
GABREP78334 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.55■□□□□ 0.24
GABREP78334 AC068137.2-201ENST00000605408 478 ntBASIC16.55■□□□□ 0.24
GABREP78334 AL353135.1-201ENST00000606729 504 ntBASIC16.55■□□□□ 0.24
GABREP78334 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.55■□□□□ 0.24
GABREP78334 AC092902.6-201ENST00000641783 218 ntBASIC16.55■□□□□ 0.24
GABREP78334 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
GABREP78334 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
GABREP78334 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.55■□□□□ 0.24
GABREP78334 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GABREP78334 AC104581.1-202ENST00000635932 2618 ntBASIC16.54■□□□□ 0.24
GABREP78334 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
GABREP78334 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.54■□□□□ 0.24
GABREP78334 LINC00982-205ENST00000420957 435 ntBASIC16.54■□□□□ 0.24
GABREP78334 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.54■□□□□ 0.24
GABREP78334 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.54■□□□□ 0.24
GABREP78334 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.54■□□□□ 0.24
GABREP78334 AC105339.1-204ENST00000636249 355 ntBASIC16.54■□□□□ 0.24
GABREP78334 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.54■□□□□ 0.24
GABREP78334 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 AC090164.3-201ENST00000610780 2143 ntBASIC16.54■□□□□ 0.24
GABREP78334 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
GABREP78334 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
GABREP78334 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.53■□□□□ 0.24
GABREP78334 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
GABREP78334 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.53■□□□□ 0.24
GABREP78334 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
GABREP78334 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
GABREP78334 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.53■□□□□ 0.24
GABREP78334 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.53■□□□□ 0.24
GABREP78334 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.53■□□□□ 0.24
GABREP78334 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GABREP78334 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GABREP78334 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms