Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 AGGF1P2-201ENST00000426656 2106 ntBASIC19.6■□□□□ 0.73
TPM4P67936 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TPM4P67936 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 TSPY14P-201ENST00000303979 915 ntBASIC19.6■□□□□ 0.73
TPM4P67936 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.6■□□□□ 0.73
TPM4P67936 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.6■□□□□ 0.73
TPM4P67936 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.6■□□□□ 0.73
TPM4P67936 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM4P67936 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM4P67936 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM4P67936 AC105020.1-201ENST00000435356 2205 ntBASIC19.6■□□□□ 0.73
TPM4P67936 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TPM4P67936 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.6■□□□□ 0.73
TPM4P67936 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.6■□□□□ 0.73
TPM4P67936 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.6■□□□□ 0.73
TPM4P67936 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TPM4P67936 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TPM4P67936 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TPM4P67936 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TPM4P67936 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TPM4P67936 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 AC116353.5-201ENST00000638148 1699 ntBASIC19.59■□□□□ 0.73
TPM4P67936 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TPM4P67936 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM4P67936 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.59■□□□□ 0.73
TPM4P67936 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TPM4P67936 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM4P67936 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM4P67936 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.59■□□□□ 0.73
TPM4P67936 AP000523.1-201ENST00000398242 1049 ntBASIC19.59■□□□□ 0.73
TPM4P67936 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 MIR1238-201ENST00000408483 83 ntBASIC19.59■□□□□ 0.73
TPM4P67936 AC005104.2-201ENST00000427818 678 ntBASIC19.59■□□□□ 0.73
TPM4P67936 AL390955.1-201ENST00000428694 934 ntBASIC19.59■□□□□ 0.73
TPM4P67936 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM4P67936 EGLN1P1-201ENST00000531623 762 ntBASIC19.59■□□□□ 0.73
TPM4P67936 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM4P67936 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TPM4P67936 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM4P67936 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.58■□□□□ 0.73
TPM4P67936 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TPM4P67936 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.58■□□□□ 0.73
TPM4P67936 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.58■□□□□ 0.73
TPM4P67936 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM4P67936 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM4P67936 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM4P67936 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.58■□□□□ 0.72
TPM4P67936 MIR4785-201ENST00000585005 73 ntBASIC19.58■□□□□ 0.72
TPM4P67936 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.58■□□□□ 0.72
TPM4P67936 AC024563.2-201ENST00000603282 481 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms