Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
WNT3P56703 AC090340.1-201ENST00000620778 4980 ntBASIC16.52■□□□□ 0.23
WNT3P56703 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3P56703 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3P56703 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3P56703 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3P56703 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3P56703 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
WNT3P56703 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
WNT3P56703 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
WNT3P56703 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 MYCLP1-201ENST00000372451 1075 ntBASIC16.51■□□□□ 0.23
WNT3P56703 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.51■□□□□ 0.23
WNT3P56703 TSSC2-201ENST00000450217 709 ntBASIC16.51■□□□□ 0.23
WNT3P56703 BX276092.5-203ENST00000456199 560 ntBASIC16.51■□□□□ 0.23
WNT3P56703 AC122714.2-201ENST00000502787 707 ntBASIC16.51■□□□□ 0.23
WNT3P56703 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
WNT3P56703 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
WNT3P56703 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.51■□□□□ 0.23
WNT3P56703 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
WNT3P56703 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3P56703 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3P56703 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
WNT3P56703 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3P56703 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.5■□□□□ 0.23
WNT3P56703 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3P56703 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 AP002383.4-201ENST00000442518 975 ntBASIC16.5■□□□□ 0.23
WNT3P56703 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
WNT3P56703 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.5■□□□□ 0.23
WNT3P56703 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.5■□□□□ 0.23
WNT3P56703 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.5■□□□□ 0.23
WNT3P56703 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.5■□□□□ 0.23
WNT3P56703 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
WNT3P56703 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.5■□□□□ 0.23
WNT3P56703 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
WNT3P56703 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.5■□□□□ 0.23
WNT3P56703 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 AC105020.1-201ENST00000435356 2205 ntBASIC16.5■□□□□ 0.23
WNT3P56703 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 AC005915.1-201ENST00000624912 2018 ntBASIC16.5■□□□□ 0.23
WNT3P56703 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
WNT3P56703 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms