Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFERP55789 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.66■□□□□ 0.26
GFERP55789 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.66■□□□□ 0.26
GFERP55789 AC018845.2-201ENST00000568326 409 ntBASIC16.66■□□□□ 0.26
GFERP55789 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
GFERP55789 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.66■□□□□ 0.26
GFERP55789 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.66■□□□□ 0.26
GFERP55789 AL139327.4-201ENST00000612362 153 ntBASIC16.66■□□□□ 0.26
GFERP55789 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.66■□□□□ 0.26
GFERP55789 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFERP55789 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.66■□□□□ 0.26
GFERP55789 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFERP55789 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFERP55789 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFERP55789 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
GFERP55789 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
GFERP55789 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.65■□□□□ 0.26
GFERP55789 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
GFERP55789 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.65■□□□□ 0.26
GFERP55789 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.65■□□□□ 0.26
GFERP55789 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.65■□□□□ 0.26
GFERP55789 AC002347.1-201ENST00000569543 541 ntBASIC16.65■□□□□ 0.26
GFERP55789 LINC01451-201ENST00000623792 534 ntBASIC16.65■□□□□ 0.26
GFERP55789 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
GFERP55789 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
GFERP55789 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 AL390961.4-201ENST00000623958 2535 ntBASIC16.65■□□□□ 0.26
GFERP55789 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
GFERP55789 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GFERP55789 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
GFERP55789 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.64■□□□□ 0.25
GFERP55789 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
GFERP55789 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 AL355312.1-201ENST00000407115 2176 ntBASIC16.64■□□□□ 0.25
GFERP55789 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.64■□□□□ 0.25
GFERP55789 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 AP002414.1-201ENST00000391405 1147 ntBASIC16.64■□□□□ 0.25
GFERP55789 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.64■□□□□ 0.25
GFERP55789 RPSAP43-201ENST00000402237 625 ntBASIC16.64■□□□□ 0.25
GFERP55789 UPF3AP3-201ENST00000420996 769 ntBASIC16.64■□□□□ 0.25
GFERP55789 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.64■□□□□ 0.25
GFERP55789 ACTG1P4-201ENST00000425123 1122 ntBASIC16.64■□□□□ 0.25
GFERP55789 GPX1P2-201ENST00000429271 606 ntBASIC16.64■□□□□ 0.25
GFERP55789 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 HCG4B-203ENST00000450128 991 ntBASIC16.64■□□□□ 0.25
GFERP55789 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.64■□□□□ 0.25
GFERP55789 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.64■□□□□ 0.25
GFERP55789 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.64■□□□□ 0.25
GFERP55789 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.64■□□□□ 0.25
GFERP55789 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.64■□□□□ 0.25
GFERP55789 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.64■□□□□ 0.25
GFERP55789 AC055717.3-201ENST00000622967 595 ntBASIC16.64■□□□□ 0.25
GFERP55789 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.64■□□□□ 0.25
GFERP55789 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
GFERP55789 AC138932.1-201ENST00000534164 6830 ntBASIC16.64■□□□□ 0.25
GFERP55789 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
GFERP55789 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.64■□□□□ 0.25
GFERP55789 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.64■□□□□ 0.25
GFERP55789 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
GFERP55789 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
GFERP55789 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms