Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
ZNF140P52738 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF140P52738 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ZNF140P52738 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ZNF140P52738 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ZNF140P52738 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF140P52738 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF140P52738 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF140P52738 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF140P52738 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF140P52738 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.36■□□□□ 0.37
ZNF140P52738 REXO1L6P-202ENST00000619970 1078 ntBASIC17.36■□□□□ 0.37
ZNF140P52738 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.36■□□□□ 0.37
ZNF140P52738 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF140P52738 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.36■□□□□ 0.37
ZNF140P52738 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.36■□□□□ 0.37
ZNF140P52738 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ZNF140P52738 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF140P52738 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ZNF140P52738 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF140P52738 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 AKR1C7P-201ENST00000305623 895 ntBASIC17.35■□□□□ 0.37
ZNF140P52738 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 SIGLEC30P-201ENST00000455569 941 ntBASIC17.35■□□□□ 0.37
ZNF140P52738 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.35■□□□□ 0.37
ZNF140P52738 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.35■□□□□ 0.37
ZNF140P52738 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF140P52738 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.35■□□□□ 0.37
ZNF140P52738 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
ZNF140P52738 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF140P52738 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ZNF140P52738 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ZNF140P52738 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.35■□□□□ 0.37
ZNF140P52738 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ZNF140P52738 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF140P52738 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF140P52738 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF140P52738 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF140P52738 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ZNF140P52738 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF140P52738 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF140P52738 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.34■□□□□ 0.37
ZNF140P52738 AC020916.1-201ENST00000587762 1774 ntBASIC17.34■□□□□ 0.37
ZNF140P52738 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ZNF140P52738 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.34■□□□□ 0.37
ZNF140P52738 AL355877.3-201ENST00000622820 899 ntBASIC17.34■□□□□ 0.37
ZNF140P52738 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.34■□□□□ 0.37
ZNF140P52738 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ZNF140P52738 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 LTB4R2-202ENST00000528054 3092 ntBASIC17.34■□□□□ 0.37
ZNF140P52738 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ZNF140P52738 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
ZNF140P52738 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF140P52738 AC004817.3-201ENST00000602957 2129 ntBASIC17.33■□□□□ 0.37
ZNF140P52738 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms