Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.67■□□□□ 0.26
PRIM2P49643 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.67■□□□□ 0.26
PRIM2P49643 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.67■□□□□ 0.26
PRIM2P49643 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.67■□□□□ 0.26
PRIM2P49643 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.67■□□□□ 0.26
PRIM2P49643 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.67■□□□□ 0.26
PRIM2P49643 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 AD000864.1-201ENST00000624076 2295 ntBASIC16.67■□□□□ 0.26
PRIM2P49643 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
PRIM2P49643 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRIM2P49643 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.67■□□□□ 0.26
PRIM2P49643 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.67■□□□□ 0.26
PRIM2P49643 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.67■□□□□ 0.26
PRIM2P49643 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRIM2P49643 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRIM2P49643 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 AC112698.1-201ENST00000510299 916 ntBASIC16.66■□□□□ 0.26
PRIM2P49643 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 AL390719.2-201ENST00000606993 987 ntBASIC16.66■□□□□ 0.26
PRIM2P49643 AC083849.1-201ENST00000615227 514 ntBASIC16.66■□□□□ 0.26
PRIM2P49643 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.66■□□□□ 0.26
PRIM2P49643 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRIM2P49643 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.66■□□□□ 0.26
PRIM2P49643 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.66■□□□□ 0.26
PRIM2P49643 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.66■□□□□ 0.26
PRIM2P49643 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRIM2P49643 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRIM2P49643 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRIM2P49643 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 REXO1L11P-201ENST00000620964 1927 ntBASIC16.65■□□□□ 0.26
PRIM2P49643 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.65■□□□□ 0.26
PRIM2P49643 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.65■□□□□ 0.26
PRIM2P49643 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.65■□□□□ 0.26
PRIM2P49643 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.65■□□□□ 0.26
PRIM2P49643 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.65■□□□□ 0.26
PRIM2P49643 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
PRIM2P49643 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.65■□□□□ 0.26
PRIM2P49643 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.65■□□□□ 0.26
PRIM2P49643 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRIM2P49643 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRIM2P49643 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRIM2P49643 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms