Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTPN6P29350 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN6P29350 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN6P29350 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN6P29350 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PTPN6P29350 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN6P29350 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN6P29350 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PTPN6P29350 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN6P29350 HTR7P1-202ENST00000624664 4411 ntBASIC16.58■□□□□ 0.25
PTPN6P29350 TNRC18P3-201ENST00000441896 2691 ntBASIC16.58■□□□□ 0.25
PTPN6P29350 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PTPN6P29350 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
PTPN6P29350 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN6P29350 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PTPN6P29350 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
PTPN6P29350 TSSC2-201ENST00000450217 709 ntBASIC16.58■□□□□ 0.24
PTPN6P29350 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN6P29350 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTPN6P29350 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PTPN6P29350 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.58■□□□□ 0.24
PTPN6P29350 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 AC010460.3-201ENST00000511359 1579 ntBASIC16.58■□□□□ 0.24
PTPN6P29350 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.58■□□□□ 0.24
PTPN6P29350 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PTPN6P29350 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PTPN6P29350 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.58■□□□□ 0.24
PTPN6P29350 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.58■□□□□ 0.24
PTPN6P29350 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PTPN6P29350 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN6P29350 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN6P29350 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN6P29350 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PTPN6P29350 AC097374.2-201ENST00000618617 1306 ntBASIC16.57■□□□□ 0.24
PTPN6P29350 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 ATP5G2P1-201ENST00000433580 426 ntBASIC16.57■□□□□ 0.24
PTPN6P29350 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 AC002558.1-201ENST00000488906 803 ntBASIC16.57■□□□□ 0.24
PTPN6P29350 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN6P29350 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN6P29350 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PTPN6P29350 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN6P29350 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN6P29350 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PTPN6P29350 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN6P29350 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN6P29350 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN6P29350 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN6P29350 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PTPN6P29350 CHCHD2P8-201ENST00000429873 447 ntBASIC16.56■□□□□ 0.24
PTPN6P29350 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN6P29350 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN6P29350 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN6P29350 NPAP1P7-201ENST00000613027 823 ntBASIC16.56■□□□□ 0.24
PTPN6P29350 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.56■□□□□ 0.24
PTPN6P29350 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN6P29350 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN6P29350 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN6P29350 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms