Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR1BP28222 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.42■□□□□ 0.38
HTR1BP28222 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR1BP28222 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.42■□□□□ 0.38
HTR1BP28222 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 AL022326.1-202ENST00000641533 845 ntBASIC17.42■□□□□ 0.38
HTR1BP28222 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
HTR1BP28222 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
HTR1BP28222 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HTR1BP28222 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HTR1BP28222 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR1BP28222 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HTR1BP28222 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 AC008764.6-201ENST00000595909 2069 ntBASIC17.41■□□□□ 0.38
HTR1BP28222 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HTR1BP28222 SIRPAP1-201ENST00000448467 1770 ntBASIC17.41■□□□□ 0.38
HTR1BP28222 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR1BP28222 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1BP28222 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1BP28222 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1BP28222 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1BP28222 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1BP28222 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1BP28222 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.41■□□□□ 0.38
HTR1BP28222 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1BP28222 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 MIR7706-201ENST00000613747 67 ntBASIC17.41■□□□□ 0.38
HTR1BP28222 AC073592.5-201ENST00000624854 528 ntBASIC17.41■□□□□ 0.38
HTR1BP28222 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR1BP28222 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HTR1BP28222 FLJ13224-201ENST00000313737 1514 ntBASIC17.41■□□□□ 0.38
HTR1BP28222 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1BP28222 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HTR1BP28222 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 AC100803.2-201ENST00000562459 1963 ntBASIC17.4■□□□□ 0.38
HTR1BP28222 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR1BP28222 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR1BP28222 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR1BP28222 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 AC025062.2-201ENST00000605477 670 ntBASIC17.4■□□□□ 0.38
HTR1BP28222 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HTR1BP28222 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1BP28222 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HTR1BP28222 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR1BP28222 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 AC009949.1-201ENST00000623048 1830 ntBASIC17.4■□□□□ 0.38
HTR1BP28222 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1BP28222 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.39■□□□□ 0.38
HTR1BP28222 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.39■□□□□ 0.38
HTR1BP28222 SIGLEC16-201ENST00000599858 1437 ntBASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms