Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.85■□□□□ 0.13
GDF1P27539 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.85■□□□□ 0.13
GDF1P27539 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.85■□□□□ 0.13
GDF1P27539 AC009336.1-201ENST00000608941 1553 ntBASIC15.85■□□□□ 0.13
GDF1P27539 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.85■□□□□ 0.13
GDF1P27539 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.85■□□□□ 0.13
GDF1P27539 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.85■□□□□ 0.13
GDF1P27539 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.85■□□□□ 0.13
GDF1P27539 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.85■□□□□ 0.13
GDF1P27539 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.85■□□□□ 0.13
GDF1P27539 AC012640.2-201ENST00000561606 901 ntBASIC15.85■□□□□ 0.13
GDF1P27539 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.85■□□□□ 0.13
GDF1P27539 AC006557.2-201ENST00000592985 1240 ntBASIC15.85■□□□□ 0.13
GDF1P27539 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.85■□□□□ 0.13
GDF1P27539 MIR1199-201ENST00000621445 119 ntBASIC15.85■□□□□ 0.13
GDF1P27539 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GDF1P27539 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
GDF1P27539 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GDF1P27539 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.85■□□□□ 0.13
GDF1P27539 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
GDF1P27539 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
GDF1P27539 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
GDF1P27539 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
GDF1P27539 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.84■□□□□ 0.13
GDF1P27539 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GDF1P27539 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.84■□□□□ 0.13
GDF1P27539 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.84■□□□□ 0.13
GDF1P27539 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.84■□□□□ 0.13
GDF1P27539 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.84■□□□□ 0.13
GDF1P27539 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 AL589182.2-201ENST00000619332 1049 ntBASIC15.84■□□□□ 0.13
GDF1P27539 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.84■□□□□ 0.13
GDF1P27539 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.84■□□□□ 0.13
GDF1P27539 NCF1C-201ENST00000438382 1427 ntBASIC15.84■□□□□ 0.13
GDF1P27539 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GDF1P27539 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.84■□□□□ 0.13
GDF1P27539 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.83■□□□□ 0.13
GDF1P27539 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GDF1P27539 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDF1P27539 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDF1P27539 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GDF1P27539 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDF1P27539 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
GDF1P27539 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.83■□□□□ 0.12
GDF1P27539 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.83■□□□□ 0.12
GDF1P27539 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.83■□□□□ 0.12
GDF1P27539 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
GDF1P27539 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.83■□□□□ 0.12
GDF1P27539 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.83■□□□□ 0.12
GDF1P27539 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.83■□□□□ 0.12
GDF1P27539 SLC25A6P5-201ENST00000435663 894 ntBASIC15.83■□□□□ 0.12
GDF1P27539 AC098831.1-202ENST00000438821 336 ntBASIC15.83■□□□□ 0.12
GDF1P27539 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.83■□□□□ 0.12
GDF1P27539 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.83■□□□□ 0.12
GDF1P27539 SLC25A1P1-201ENST00000528351 927 ntBASIC15.83■□□□□ 0.12
GDF1P27539 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.83■□□□□ 0.12
GDF1P27539 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.83■□□□□ 0.12
GDF1P27539 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.83■□□□□ 0.12
GDF1P27539 LINC01451-201ENST00000623792 534 ntBASIC15.83■□□□□ 0.12
GDF1P27539 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms