Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.78■□□□□ 0.28
PTX3P26022 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTX3P26022 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.78■□□□□ 0.28
PTX3P26022 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PTX3P26022 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PTX3P26022 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
PTX3P26022 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.77■□□□□ 0.28
PTX3P26022 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.77■□□□□ 0.28
PTX3P26022 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 AL049757.1-201ENST00000616842 1596 ntBASIC16.77■□□□□ 0.28
PTX3P26022 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.77■□□□□ 0.28
PTX3P26022 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.77■□□□□ 0.28
PTX3P26022 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.77■□□□□ 0.28
PTX3P26022 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
PTX3P26022 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.77■□□□□ 0.28
PTX3P26022 MIR3180-1-201ENST00000580374 94 ntBASIC16.77■□□□□ 0.28
PTX3P26022 MIR3180-3-201ENST00000584616 94 ntBASIC16.77■□□□□ 0.28
PTX3P26022 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.77■□□□□ 0.28
PTX3P26022 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.77■□□□□ 0.28
PTX3P26022 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PTX3P26022 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTX3P26022 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTX3P26022 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
PTX3P26022 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTX3P26022 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 NSUN5P1-202ENST00000421140 1535 ntBASIC16.76■□□□□ 0.27
PTX3P26022 NSUN5P2-203ENST00000457352 1529 ntBASIC16.76■□□□□ 0.27
PTX3P26022 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.76■□□□□ 0.27
PTX3P26022 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTX3P26022 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.76■□□□□ 0.27
PTX3P26022 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PTX3P26022 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PTX3P26022 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.76■□□□□ 0.27
PTX3P26022 IGHV3-47-201ENST00000425060 335 ntBASIC16.76■□□□□ 0.27
PTX3P26022 ATP5G2P1-201ENST00000433580 426 ntBASIC16.76■□□□□ 0.27
PTX3P26022 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.76■□□□□ 0.27
PTX3P26022 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.76■□□□□ 0.27
PTX3P26022 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.76■□□□□ 0.27
PTX3P26022 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTX3P26022 NPAP1P7-201ENST00000613027 823 ntBASIC16.76■□□□□ 0.27
PTX3P26022 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.76■□□□□ 0.27
PTX3P26022 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTX3P26022 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.76■□□□□ 0.27
PTX3P26022 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.76■□□□□ 0.27
PTX3P26022 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTX3P26022 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.76■□□□□ 0.27
PTX3P26022 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.75■□□□□ 0.27
PTX3P26022 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTX3P26022 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.75■□□□□ 0.27
PTX3P26022 AL121761.2-201ENST00000598007 1648 ntBASIC16.75■□□□□ 0.27
PTX3P26022 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
PTX3P26022 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTX3P26022 POM121L3P-201ENST00000419331 1163 ntBASIC16.75■□□□□ 0.27
PTX3P26022 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.75■□□□□ 0.27
PTX3P26022 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.75■□□□□ 0.27
PTX3P26022 AC104819.1-201ENST00000504587 486 ntBASIC16.75■□□□□ 0.27
PTX3P26022 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.75■□□□□ 0.27
PTX3P26022 AC074051.2-201ENST00000565115 352 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms