Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TNFSF4P23510 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TNFSF4P23510 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TNFSF4P23510 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFSF4P23510 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFSF4P23510 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TNFSF4P23510 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TNFSF4P23510 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.97□□□□□ -0.01
TNFSF4P23510 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.97□□□□□ -0.01
TNFSF4P23510 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 RBM17P3-201ENST00000417687 1192 ntBASIC14.97□□□□□ -0.01
TNFSF4P23510 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 ABCD1P5-201ENST00000445663 754 ntBASIC14.97□□□□□ -0.01
TNFSF4P23510 FAAHP1-202ENST00000446499 1238 ntBASIC14.97□□□□□ -0.01
TNFSF4P23510 AC132008.2-207ENST00000454517 770 ntBASIC14.97□□□□□ -0.01
TNFSF4P23510 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.97□□□□□ -0.01
TNFSF4P23510 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
TNFSF4P23510 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.97□□□□□ -0.01
TNFSF4P23510 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
TNFSF4P23510 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.97□□□□□ -0.01
TNFSF4P23510 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFSF4P23510 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TNFSF4P23510 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.97□□□□□ -0.01
TNFSF4P23510 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TNFSF4P23510 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TNFSF4P23510 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TNFSF4P23510 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFSF4P23510 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TNFSF4P23510 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFSF4P23510 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TNFSF4P23510 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.96□□□□□ -0.01
TNFSF4P23510 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFSF4P23510 SCARNA2-201ENST00000458748 420 ntBASIC14.96□□□□□ -0.01
TNFSF4P23510 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.96□□□□□ -0.01
TNFSF4P23510 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.96□□□□□ -0.01
TNFSF4P23510 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.96□□□□□ -0.01
TNFSF4P23510 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.96□□□□□ -0.01
TNFSF4P23510 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.96□□□□□ -0.01
TNFSF4P23510 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TNFSF4P23510 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFSF4P23510 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.96□□□□□ -0.01
TNFSF4P23510 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TNFSF4P23510 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TNFSF4P23510 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TNFSF4P23510 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TNFSF4P23510 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TNFSF4P23510 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TNFSF4P23510 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TNFSF4P23510 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TNFSF4P23510 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 GNAS-203ENST00000306120 1878 ntBASIC14.95□□□□□ -0.02
TNFSF4P23510 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.95□□□□□ -0.02
TNFSF4P23510 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
TNFSF4P23510 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TNFSF4P23510 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFSF4P23510 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.95□□□□□ -0.02
TNFSF4P23510 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.95□□□□□ -0.02
TNFSF4P23510 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms