Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC022211.2-201ENST00000585075 2527 ntBASIC18.36■□□□□ 0.53
MMP8P22894 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.36■□□□□ 0.53
MMP8P22894 LINC02012-201ENST00000608206 1725 ntBASIC18.36■□□□□ 0.53
MMP8P22894 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP8P22894 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.36■□□□□ 0.53
MMP8P22894 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
MMP8P22894 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MMP8P22894 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MMP8P22894 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MMP8P22894 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP8P22894 NUS1P1-201ENST00000446295 882 ntBASIC18.35■□□□□ 0.53
MMP8P22894 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.35■□□□□ 0.53
MMP8P22894 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 AC138894.3-201ENST00000603787 634 ntBASIC18.35■□□□□ 0.53
MMP8P22894 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP8P22894 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MMP8P22894 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP8P22894 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.35■□□□□ 0.53
MMP8P22894 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.35■□□□□ 0.53
MMP8P22894 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MMP8P22894 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 AC090340.1-201ENST00000620778 4980 ntBASIC18.34■□□□□ 0.53
MMP8P22894 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MMP8P22894 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MMP8P22894 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP8P22894 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 PRORSD1P-202ENST00000563365 2154 ntBASIC18.34■□□□□ 0.53
MMP8P22894 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.34■□□□□ 0.53
MMP8P22894 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
MMP8P22894 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 SPDYE21P-201ENST00000413323 827 ntBASIC18.34■□□□□ 0.53
MMP8P22894 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 HCG4P8-203ENST00000443049 980 ntBASIC18.34■□□□□ 0.53
MMP8P22894 AL591684.3-201ENST00000605187 298 ntBASIC18.34■□□□□ 0.53
MMP8P22894 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.34■□□□□ 0.53
MMP8P22894 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
MMP8P22894 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MMP8P22894 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
MMP8P22894 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP8P22894 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.33■□□□□ 0.53
MMP8P22894 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms