Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.36■□□□□ 0.53
RB1P06400 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RB1P06400 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.36■□□□□ 0.53
RB1P06400 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.36■□□□□ 0.53
RB1P06400 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.36■□□□□ 0.53
RB1P06400 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.36■□□□□ 0.53
RB1P06400 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.36■□□□□ 0.53
RB1P06400 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RB1P06400 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
RB1P06400 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RB1P06400 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RB1P06400 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.35■□□□□ 0.53
RB1P06400 TUBB3P1-201ENST00000405796 1332 ntBASIC18.35■□□□□ 0.53
RB1P06400 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.35■□□□□ 0.53
RB1P06400 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.35■□□□□ 0.53
RB1P06400 AC015922.1-201ENST00000421102 1152 ntBASIC18.35■□□□□ 0.53
RB1P06400 AC079140.1-201ENST00000508039 487 ntBASIC18.35■□□□□ 0.53
RB1P06400 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
RB1P06400 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.35■□□□□ 0.53
RB1P06400 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.35■□□□□ 0.53
RB1P06400 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RB1P06400 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.35■□□□□ 0.53
RB1P06400 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.35■□□□□ 0.53
RB1P06400 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RB1P06400 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RB1P06400 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RB1P06400 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RB1P06400 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.34■□□□□ 0.53
RB1P06400 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
RB1P06400 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RB1P06400 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.34■□□□□ 0.53
RB1P06400 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.34■□□□□ 0.53
RB1P06400 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 KRT18P32-201ENST00000424695 1287 ntBASIC18.34■□□□□ 0.53
RB1P06400 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.34■□□□□ 0.53
RB1P06400 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.34■□□□□ 0.53
RB1P06400 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RB1P06400 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.34■□□□□ 0.53
RB1P06400 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.34■□□□□ 0.53
RB1P06400 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.34■□□□□ 0.53
RB1P06400 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.34■□□□□ 0.53
RB1P06400 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 AC087641.1-201ENST00000557561 1021 ntBASIC18.34■□□□□ 0.53
RB1P06400 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.34■□□□□ 0.53
RB1P06400 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RB1P06400 AL135999.2-201ENST00000622438 1686 ntBASIC18.34■□□□□ 0.53
RB1P06400 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.34■□□□□ 0.53
RB1P06400 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.34■□□□□ 0.53
RB1P06400 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RB1P06400 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RB1P06400 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
RB1P06400 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RB1P06400 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.33■□□□□ 0.53
RB1P06400 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RB1P06400 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RB1P06400 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RB1P06400 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RB1P06400 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RB1P06400 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RB1P06400 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.33■□□□□ 0.52
RB1P06400 AC005034.1-201ENST00000426657 489 ntBASIC18.33■□□□□ 0.52
RB1P06400 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RB1P06400 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.33■□□□□ 0.52
RB1P06400 TERF1P3-201ENST00000505638 1227 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms