Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL139327.4-201ENST00000612362 153 ntBASIC19.1■□□□□ 0.65
VTNP04004 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.1■□□□□ 0.65
VTNP04004 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.1■□□□□ 0.65
VTNP04004 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VTNP04004 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.1■□□□□ 0.65
VTNP04004 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTNP04004 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.09■□□□□ 0.65
VTNP04004 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.09■□□□□ 0.65
VTNP04004 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 AP002414.1-201ENST00000391405 1147 ntBASIC19.09■□□□□ 0.65
VTNP04004 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.09■□□□□ 0.65
VTNP04004 PRSS29P-201ENST00000440800 595 ntBASIC19.09■□□□□ 0.65
VTNP04004 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.09■□□□□ 0.65
VTNP04004 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.09■□□□□ 0.65
VTNP04004 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 LINC01451-201ENST00000623792 534 ntBASIC19.09■□□□□ 0.65
VTNP04004 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VTNP04004 AC092865.6-201ENST00000642101 219 ntBASIC19.09■□□□□ 0.65
VTNP04004 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
VTNP04004 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.09■□□□□ 0.65
VTNP04004 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTNP04004 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
VTNP04004 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
VTNP04004 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VTNP04004 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.08■□□□□ 0.65
VTNP04004 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VTNP04004 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.08■□□□□ 0.65
VTNP04004 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VTNP04004 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VTNP04004 AL590787.1-201ENST00000568856 1315 ntBASIC19.08■□□□□ 0.65
VTNP04004 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.08■□□□□ 0.65
VTNP04004 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VTNP04004 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTNP04004 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
VTNP04004 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.08■□□□□ 0.64
VTNP04004 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTNP04004 MRPL20P1-201ENST00000400819 433 ntBASIC19.08■□□□□ 0.64
VTNP04004 IGLL3P-201ENST00000412472 434 ntBASIC19.08■□□□□ 0.64
VTNP04004 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.08■□□□□ 0.64
VTNP04004 AL691403.2-201ENST00000618460 490 ntBASIC19.08■□□□□ 0.64
VTNP04004 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.08■□□□□ 0.64
VTNP04004 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.08■□□□□ 0.64
VTNP04004 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VTNP04004 AL390961.4-201ENST00000623958 2535 ntBASIC19.08■□□□□ 0.64
VTNP04004 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTNP04004 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VTNP04004 AL355312.1-201ENST00000407115 2176 ntBASIC19.08■□□□□ 0.64
VTNP04004 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTNP04004 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
VTNP04004 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
VTNP04004 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.07■□□□□ 0.64
VTNP04004 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.07■□□□□ 0.64
VTNP04004 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
VTNP04004 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.07■□□□□ 0.64
VTNP04004 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.07■□□□□ 0.64
VTNP04004 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.07■□□□□ 0.64
VTNP04004 DNAJB3-201ENST00000446806 729 ntBASIC19.07■□□□□ 0.64
VTNP04004 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.07■□□□□ 0.64
VTNP04004 OR7E47P-204ENST00000575924 449 ntBASIC19.07■□□□□ 0.64
VTNP04004 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.07■□□□□ 0.64
VTNP04004 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VTNP04004 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.07■□□□□ 0.64
VTNP04004 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms