Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
OPN1SWP03999 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
OPN1SWP03999 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.35■□□□□ 0.21
OPN1SWP03999 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.34■□□□□ 0.21
OPN1SWP03999 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.34■□□□□ 0.21
OPN1SWP03999 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
OPN1SWP03999 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
OPN1SWP03999 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.34■□□□□ 0.21
OPN1SWP03999 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.34■□□□□ 0.21
OPN1SWP03999 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.34■□□□□ 0.21
OPN1SWP03999 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 AC133561.5-201ENST00000635547 218 ntBASIC16.34■□□□□ 0.21
OPN1SWP03999 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
OPN1SWP03999 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
OPN1SWP03999 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.34■□□□□ 0.21
OPN1SWP03999 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
OPN1SWP03999 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
OPN1SWP03999 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
OPN1SWP03999 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.33■□□□□ 0.21
OPN1SWP03999 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
OPN1SWP03999 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.33■□□□□ 0.21
OPN1SWP03999 AC005915.1-201ENST00000624912 2018 ntBASIC16.33■□□□□ 0.21
OPN1SWP03999 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 AC117947.1-201ENST00000427448 529 ntBASIC16.33■□□□□ 0.2
OPN1SWP03999 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 KRT18P38-201ENST00000449496 1282 ntBASIC16.33■□□□□ 0.2
OPN1SWP03999 AC068472.1-201ENST00000474589 881 ntBASIC16.33■□□□□ 0.2
OPN1SWP03999 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.33■□□□□ 0.2
OPN1SWP03999 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.33■□□□□ 0.2
OPN1SWP03999 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.33■□□□□ 0.2
OPN1SWP03999 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.33■□□□□ 0.2
OPN1SWP03999 AL139327.4-201ENST00000612362 153 ntBASIC16.33■□□□□ 0.2
OPN1SWP03999 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.33■□□□□ 0.2
OPN1SWP03999 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.33■□□□□ 0.2
OPN1SWP03999 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.33■□□□□ 0.2
OPN1SWP03999 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
OPN1SWP03999 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
OPN1SWP03999 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.33■□□□□ 0.2
OPN1SWP03999 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.33■□□□□ 0.2
OPN1SWP03999 AC116353.5-201ENST00000638148 1699 ntBASIC16.33■□□□□ 0.2
OPN1SWP03999 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.33■□□□□ 0.2
OPN1SWP03999 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.33■□□□□ 0.2
OPN1SWP03999 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.33■□□□□ 0.2
OPN1SWP03999 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
OPN1SWP03999 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
OPN1SWP03999 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
OPN1SWP03999 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.32■□□□□ 0.2
OPN1SWP03999 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
OPN1SWP03999 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
OPN1SWP03999 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
OPN1SWP03999 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
OPN1SWP03999 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
OPN1SWP03999 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
OPN1SWP03999 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms