Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
KRT6AP02538 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.96■□□□□ 0.31
KRT6AP02538 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6AP02538 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6AP02538 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.96■□□□□ 0.31
KRT6AP02538 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
KRT6AP02538 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
KRT6AP02538 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.96■□□□□ 0.3
KRT6AP02538 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT6AP02538 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.96■□□□□ 0.3
KRT6AP02538 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.96■□□□□ 0.3
KRT6AP02538 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT6AP02538 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT6AP02538 AL121761.2-201ENST00000598007 1648 ntBASIC16.96■□□□□ 0.3
KRT6AP02538 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.96■□□□□ 0.3
KRT6AP02538 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.96■□□□□ 0.3
KRT6AP02538 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
KRT6AP02538 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT6AP02538 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT6AP02538 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 AC010460.3-201ENST00000511359 1579 ntBASIC16.95■□□□□ 0.3
KRT6AP02538 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
KRT6AP02538 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
KRT6AP02538 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 MYCLP1-201ENST00000372451 1075 ntBASIC16.95■□□□□ 0.3
KRT6AP02538 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.95■□□□□ 0.3
KRT6AP02538 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
KRT6AP02538 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KRT6AP02538 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT6AP02538 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
KRT6AP02538 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
KRT6AP02538 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KRT6AP02538 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.95■□□□□ 0.3
KRT6AP02538 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
KRT6AP02538 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
KRT6AP02538 MST1L-201ENST00000442552 2185 ntBASIC16.95■□□□□ 0.3
KRT6AP02538 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
KRT6AP02538 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 AD000864.1-201ENST00000624076 2295 ntBASIC16.94■□□□□ 0.3
KRT6AP02538 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KRT6AP02538 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6AP02538 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
KRT6AP02538 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6AP02538 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6AP02538 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
KRT6AP02538 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.94■□□□□ 0.3
KRT6AP02538 IGHV3-52-201ENST00000519770 353 ntBASIC16.94■□□□□ 0.3
KRT6AP02538 AC090616.6-201ENST00000582640 721 ntBASIC16.94■□□□□ 0.3
KRT6AP02538 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KRT6AP02538 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT6AP02538 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 RCN1P1-201ENST00000400413 996 ntBASIC16.93■□□□□ 0.3
KRT6AP02538 TMPOP1-202ENST00000424642 1267 ntBASIC16.93■□□□□ 0.3
KRT6AP02538 RN7SL606P-201ENST00000472779 293 ntBASIC16.93■□□□□ 0.3
KRT6AP02538 AC124864.1-201ENST00000623408 392 ntBASIC16.93■□□□□ 0.3
KRT6AP02538 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KRT6AP02538 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.93■□□□□ 0.3
KRT6AP02538 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KRT6AP02538 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.93■□□□□ 0.3
KRT6AP02538 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
KRT6AP02538 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms