Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TRUB2O95900 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRUB2O95900 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRUB2O95900 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRUB2O95900 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.3■□□□□ 0.52
TRUB2O95900 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.3■□□□□ 0.52
TRUB2O95900 RBM17P3-201ENST00000417687 1192 ntBASIC18.3■□□□□ 0.52
TRUB2O95900 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB2O95900 AF238378.1-201ENST00000526806 358 ntBASIC18.3■□□□□ 0.52
TRUB2O95900 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.3■□□□□ 0.52
TRUB2O95900 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.3■□□□□ 0.52
TRUB2O95900 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.3■□□□□ 0.52
TRUB2O95900 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB2O95900 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB2O95900 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB2O95900 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.3■□□□□ 0.52
TRUB2O95900 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TRUB2O95900 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.3■□□□□ 0.52
TRUB2O95900 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.3■□□□□ 0.52
TRUB2O95900 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.3■□□□□ 0.52
TRUB2O95900 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRUB2O95900 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB2O95900 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.29■□□□□ 0.52
TRUB2O95900 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB2O95900 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB2O95900 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB2O95900 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
TRUB2O95900 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB2O95900 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB2O95900 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB2O95900 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.29■□□□□ 0.52
TRUB2O95900 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 AC073592.5-201ENST00000624854 528 ntBASIC18.29■□□□□ 0.52
TRUB2O95900 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB2O95900 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.29■□□□□ 0.52
TRUB2O95900 AC016396.2-201ENST00000562575 1417 ntBASIC18.29■□□□□ 0.52
TRUB2O95900 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRUB2O95900 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 AC132938.5-201ENST00000624980 1813 ntBASIC18.28■□□□□ 0.52
TRUB2O95900 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.28■□□□□ 0.52
TRUB2O95900 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRUB2O95900 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.28■□□□□ 0.52
TRUB2O95900 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 AC004870.1-201ENST00000315132 882 ntBASIC18.28■□□□□ 0.52
TRUB2O95900 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.28■□□□□ 0.52
TRUB2O95900 MYCLP1-201ENST00000372451 1075 ntBASIC18.28■□□□□ 0.52
TRUB2O95900 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.28■□□□□ 0.52
TRUB2O95900 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.28■□□□□ 0.52
TRUB2O95900 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TRUB2O95900 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TRUB2O95900 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.28■□□□□ 0.52
TRUB2O95900 MTDHP3-201ENST00000594186 672 ntBASIC18.28■□□□□ 0.52
TRUB2O95900 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 AC008608.2-201ENST00000606089 416 ntBASIC18.28■□□□□ 0.52
TRUB2O95900 AL355877.3-201ENST00000622820 899 ntBASIC18.28■□□□□ 0.52
TRUB2O95900 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.28■□□□□ 0.52
TRUB2O95900 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.28■□□□□ 0.52
TRUB2O95900 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 AP001094.4-201ENST00000579008 2176 ntBASIC18.28■□□□□ 0.52
TRUB2O95900 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.28■□□□□ 0.52
TRUB2O95900 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRUB2O95900 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms