Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.18■□□□□ 0.5
LRCH4O75427 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRCH4O75427 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 PMPCAP1-201ENST00000508114 1576 ntBASIC18.17■□□□□ 0.5
LRCH4O75427 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH4O75427 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH4O75427 AC009053.2-201ENST00000563701 2365 ntBASIC18.17■□□□□ 0.5
LRCH4O75427 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LRCH4O75427 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 STK19B-204ENST00000512515 211 ntBASIC18.17■□□□□ 0.5
LRCH4O75427 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH4O75427 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
LRCH4O75427 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
LRCH4O75427 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.17■□□□□ 0.5
LRCH4O75427 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRCH4O75427 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.17■□□□□ 0.5
LRCH4O75427 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.16■□□□□ 0.5
LRCH4O75427 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.16■□□□□ 0.5
LRCH4O75427 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRCH4O75427 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 KLF4P1-201ENST00000412782 1185 ntBASIC18.16■□□□□ 0.5
LRCH4O75427 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 UPK3BP1-201ENST00000428678 509 ntBASIC18.16■□□□□ 0.5
LRCH4O75427 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.16■□□□□ 0.5
LRCH4O75427 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.16■□□□□ 0.5
LRCH4O75427 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.16■□□□□ 0.5
LRCH4O75427 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.16■□□□□ 0.5
LRCH4O75427 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.16■□□□□ 0.5
LRCH4O75427 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.16■□□□□ 0.5
LRCH4O75427 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.16■□□□□ 0.5
LRCH4O75427 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRCH4O75427 AC060834.1-201ENST00000443027 2032 ntBASIC18.16■□□□□ 0.5
LRCH4O75427 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
LRCH4O75427 AD000864.1-201ENST00000624076 2295 ntBASIC18.16■□□□□ 0.5
LRCH4O75427 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRCH4O75427 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRCH4O75427 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRCH4O75427 AL135999.2-201ENST00000622438 1686 ntBASIC18.15■□□□□ 0.5
LRCH4O75427 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH4O75427 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LRCH4O75427 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.15■□□□□ 0.5
LRCH4O75427 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.15■□□□□ 0.5
LRCH4O75427 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH4O75427 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH4O75427 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.15■□□□□ 0.5
LRCH4O75427 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.15■□□□□ 0.5
LRCH4O75427 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH4O75427 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.15■□□□□ 0.5
LRCH4O75427 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms