Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC22.29■■□□□ 1.16
KCNQ3O43525 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KCNQ3O43525 PMS2P2-201ENST00000425039 1128 ntBASIC22.29■■□□□ 1.16
KCNQ3O43525 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.29■■□□□ 1.16
KCNQ3O43525 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
KCNQ3O43525 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.29■■□□□ 1.16
KCNQ3O43525 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNQ3O43525 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.29■■□□□ 1.16
KCNQ3O43525 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
KCNQ3O43525 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNQ3O43525 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
KCNQ3O43525 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.28■■□□□ 1.16
KCNQ3O43525 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNQ3O43525 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
KCNQ3O43525 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
KCNQ3O43525 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
KCNQ3O43525 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
KCNQ3O43525 ACTL9-202ENST00000612068 1252 ntBASIC22.28■■□□□ 1.16
KCNQ3O43525 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNQ3O43525 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22.28■■□□□ 1.16
KCNQ3O43525 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
KCNQ3O43525 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ3O43525 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
KCNQ3O43525 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
KCNQ3O43525 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.27■■□□□ 1.16
KCNQ3O43525 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC22.27■■□□□ 1.16
KCNQ3O43525 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNQ3O43525 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNQ3O43525 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC22.27■■□□□ 1.16
KCNQ3O43525 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNQ3O43525 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC22.27■■□□□ 1.16
KCNQ3O43525 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
KCNQ3O43525 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.27■■□□□ 1.16
KCNQ3O43525 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.27■■□□□ 1.16
KCNQ3O43525 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
KCNQ3O43525 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC22.27■■□□□ 1.16
KCNQ3O43525 AC092919.2-201ENST00000623631 1645 ntBASIC22.27■■□□□ 1.16
KCNQ3O43525 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ3O43525 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
KCNQ3O43525 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNQ3O43525 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
KCNQ3O43525 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.27■■□□□ 1.15
KCNQ3O43525 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ3O43525 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNQ3O43525 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC22.26■■□□□ 1.15
KCNQ3O43525 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
KCNQ3O43525 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ3O43525 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ3O43525 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ3O43525 FAM185BP-201ENST00000443595 716 ntBASIC22.26■■□□□ 1.15
KCNQ3O43525 CXCL1P1-201ENST00000502804 216 ntBASIC22.26■■□□□ 1.15
KCNQ3O43525 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
KCNQ3O43525 AC027796.2-201ENST00000575326 344 ntBASIC22.26■■□□□ 1.15
KCNQ3O43525 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ3O43525 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNQ3O43525 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ3O43525 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ3O43525 AL390961.4-201ENST00000623958 2535 ntBASIC22.26■■□□□ 1.15
KCNQ3O43525 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
KCNQ3O43525 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
KCNQ3O43525 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
KCNQ3O43525 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.25■■□□□ 1.15
KCNQ3O43525 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
KCNQ3O43525 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
KCNQ3O43525 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.25■■□□□ 1.15
KCNQ3O43525 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.25■■□□□ 1.15
KCNQ3O43525 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC22.25■■□□□ 1.15
KCNQ3O43525 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC22.25■■□□□ 1.15
KCNQ3O43525 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ3O43525 ELL2P1-201ENST00000413990 1906 ntBASIC22.25■■□□□ 1.15
KCNQ3O43525 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms