Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMEM88BA6NKF7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 REXO1L6P-201ENST00000603433 1515 ntBASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 AC109635.5-201ENST00000533593 962 ntBASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMEM88BA6NKF7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 HLA-V-204ENST00000476601 1289 ntBASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 AC009407.1-201ENST00000568958 598 ntBASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 AC008738.7-201ENST00000609744 511 ntBASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 AC018529.1-201ENST00000613063 361 ntBASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.08■□□□□ 0.81
TMEM88BA6NKF7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.08■□□□□ 0.8
TMEM88BA6NKF7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.08■□□□□ 0.8
TMEM88BA6NKF7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.08■□□□□ 0.8
TMEM88BA6NKF7 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.08■□□□□ 0.8
TMEM88BA6NKF7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.08■□□□□ 0.8
TMEM88BA6NKF7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMEM88BA6NKF7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
TMEM88BA6NKF7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TMEM88BA6NKF7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.06■□□□□ 0.8
TMEM88BA6NKF7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms