Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.58■□□□□ 0.57
RCCD1A6NED2 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RCCD1A6NED2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
RCCD1A6NED2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.58■□□□□ 0.56
RCCD1A6NED2 AC087499.1-201ENST00000418141 1075 ntBASIC18.58■□□□□ 0.56
RCCD1A6NED2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 RNF126P1-202ENST00000569893 925 ntBASIC18.58■□□□□ 0.56
RCCD1A6NED2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 GPR32P1-201ENST00000601788 811 ntBASIC18.58■□□□□ 0.56
RCCD1A6NED2 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RCCD1A6NED2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.58■□□□□ 0.56
RCCD1A6NED2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 AC097374.2-201ENST00000618617 1306 ntBASIC18.57■□□□□ 0.56
RCCD1A6NED2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 AC139887.4-201ENST00000607877 719 ntBASIC18.57■□□□□ 0.56
RCCD1A6NED2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 AL662844.4-201ENST00000606367 2838 ntBASIC18.57■□□□□ 0.56
RCCD1A6NED2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RCCD1A6NED2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.57■□□□□ 0.56
RCCD1A6NED2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 ZNF444P1-201ENST00000559497 298 ntBASIC18.56■□□□□ 0.56
RCCD1A6NED2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 AC005332.3-201ENST00000589904 676 ntBASIC18.56■□□□□ 0.56
RCCD1A6NED2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.56■□□□□ 0.56
RCCD1A6NED2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RCCD1A6NED2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RCCD1A6NED2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms