Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGA8Q9Y5G5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA8Q9Y5G5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGA8Q9Y5G5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.21■□□□□ 0.34
PCDHGA8Q9Y5G5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 ABCD1P5-201ENST00000445663 754 ntBASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 MTCL1P1-201ENST00000446207 792 ntBASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC084018.2-201ENST00000613093 2607 ntBASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 HLA-J-201ENST00000462773 1622 ntBASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC093677.2-201ENST00000600169 1863 ntBASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 AC125634.1-201ENST00000438758 1403 ntBASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGA8Q9Y5G5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 AC104109.2-201ENST00000602919 1418 ntBASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGA8Q9Y5G5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 AC108860.2-201ENST00000562760 2183 ntBASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGA8Q9Y5G5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms