Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RN7SL850P-201ENST00000579959 291 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AC012306.2-201ENST00000609350 630 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AC092068.3-201ENST00000587894 2016 ntBASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDHGB1Q9Y5G3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 FAM197Y1-201ENST00000421178 764 ntBASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 CD177P1-201ENST00000606252 935 ntBASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
PCDHGB1Q9Y5G3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 MIR4674-201ENST00000582457 87 ntBASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms