Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 MIR4751-201ENST00000578027 74 ntBASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 AC006504.4-201ENST00000592118 1568 ntBASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTDP1Q9Y5B0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 CRYGEP-201ENST00000412192 528 ntBASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 AC097637.2-201ENST00000624096 1997 ntBASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTDP1Q9Y5B0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 KRT18P55-202ENST00000578578 1546 ntBASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 DNAJB3-201ENST00000446806 729 ntBASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 AL139424.1-201ENST00000607572 797 ntBASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 AC064836.3-201ENST00000607928 673 ntBASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTDP1Q9Y5B0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 AC009336.1-201ENST00000608941 1553 ntBASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 AC002347.1-201ENST00000569543 541 ntBASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 AC010327.4-202ENST00000591484 748 ntBASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDP1Q9Y5B0 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDP1Q9Y5B0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDP1Q9Y5B0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDP1Q9Y5B0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDP1Q9Y5B0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms