Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.27■□□□□ 0.36
MKS1Q9NXB0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 AL023973.1-201ENST00000624619 620 ntBASIC17.27■□□□□ 0.36
MKS1Q9NXB0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
MKS1Q9NXB0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
MKS1Q9NXB0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 AC006449.5-201ENST00000610658 2098 ntBASIC17.26■□□□□ 0.35
MKS1Q9NXB0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 SPDYE15P-201ENST00000424157 909 ntBASIC17.26■□□□□ 0.35
MKS1Q9NXB0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 GPR32P1-201ENST00000601788 811 ntBASIC17.26■□□□□ 0.35
MKS1Q9NXB0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
MKS1Q9NXB0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 AC092068.3-201ENST00000587894 2016 ntBASIC17.25■□□□□ 0.35
MKS1Q9NXB0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 AP003733.1-201ENST00000491725 852 ntBASIC17.25■□□□□ 0.35
MKS1Q9NXB0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 IGHV3-52-201ENST00000519770 353 ntBASIC17.25■□□□□ 0.35
MKS1Q9NXB0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
MKS1Q9NXB0 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
MKS1Q9NXB0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms