Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 AC096734.2-201ENST00000562054 433 ntBASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 AL596442.2-201ENST00000610240 980 ntBASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 GGTLC5P-201ENST00000617623 998 ntBASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.03■□□□□ 0.8
FBXO28Q9NVF7 BCAR1-209ENST00000546196 1340 ntBASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 HTR5BP-201ENST00000430851 1154 ntBASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 KRT19P2-202ENST00000557173 1012 ntBASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 AL139327.4-201ENST00000612362 153 ntBASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 C20orf181-201ENST00000623918 480 ntBASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
FBXO28Q9NVF7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
FBXO28Q9NVF7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.02■□□□□ 0.79
FBXO28Q9NVF7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.02■□□□□ 0.79
FBXO28Q9NVF7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 AC135050.7-201ENST00000624508 2218 ntBASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 RHOQP3-201ENST00000437982 621 ntBASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 AP006288.1-201ENST00000446065 395 ntBASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 AC025580.3-201ENST00000617932 1424 ntBASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
FBXO28Q9NVF7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 AC006116.8-202ENST00000587620 1550 ntBASIC20■□□□□ 0.79
FBXO28Q9NVF7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20■□□□□ 0.79
FBXO28Q9NVF7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
FBXO28Q9NVF7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms