Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ECHDC1Q9NTX5 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 AC004817.3-201ENST00000602957 2129 ntBASIC21.28■■□□□ 1
ECHDC1Q9NTX5 AL356309.3-201ENST00000624132 1934 ntBASIC21.28■■□□□ 1
ECHDC1Q9NTX5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 NKAPP1-205ENST00000585790 367 ntBASIC21.28■■□□□ 1
ECHDC1Q9NTX5 AL139288.1-201ENST00000623748 933 ntBASIC21.28■■□□□ 1
ECHDC1Q9NTX5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 AL023806.1-201ENST00000603994 1649 ntBASIC21.28■■□□□ 1
ECHDC1Q9NTX5 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC21.28■■□□□ 1
ECHDC1Q9NTX5 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.27■■□□□ 1
ECHDC1Q9NTX5 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 BX005266.1-201ENST00000473402 457 ntBASIC21.27■■□□□ 1
ECHDC1Q9NTX5 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 SART3-203ENST00000546611 1184 ntBASIC21.27■■□□□ 1
ECHDC1Q9NTX5 RN7SL510P-201ENST00000581311 263 ntBASIC21.27■■□□□ 1
ECHDC1Q9NTX5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ECHDC1Q9NTX5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ECHDC1Q9NTX5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
ECHDC1Q9NTX5 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 AC108860.2-201ENST00000562760 2183 ntBASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 PRYP5-201ENST00000451909 266 ntBASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 AL691432.3-201ENST00000621860 400 ntBASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ECHDC1Q9NTX5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 AC116353.5-201ENST00000638148 1699 ntBASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 HCG11-201ENST00000411553 5696 ntBASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ECHDC1Q9NTX5 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms