Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 AC087163.2-201ENST00000457299 853 ntBASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 IGHV3-62-201ENST00000520057 340 ntBASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 DUX4L17-201ENST00000557360 1267 ntBASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 AC027307.3-201ENST00000594262 1100 ntBASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 AL008721.1-201ENST00000609964 604 ntBASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 AL358472.5-202ENST00000641448 1267 ntBASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZFYVE28Q9HCC9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 AP005018.1-201ENST00000525475 301 ntBASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.83■□□□□ 0.77
ZFYVE28Q9HCC9 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZFYVE28Q9HCC9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.83■□□□□ 0.76
ZFYVE28Q9HCC9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.83■□□□□ 0.76
ZFYVE28Q9HCC9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZFYVE28Q9HCC9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 AC007274.1-201ENST00000439805 662 ntBASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 AL161645.1-201ENST00000622716 1255 ntBASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 AC008677.1-201ENST00000519230 1561 ntBASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ZFYVE28Q9HCC9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 AC073592.3-201ENST00000625118 1834 ntBASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 SPCS2P4-201ENST00000436160 681 ntBASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 CR383656.12-201ENST00000549567 513 ntBASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 AC026150.2-201ENST00000564693 1156 ntBASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 AL158211.3-201ENST00000607385 239 ntBASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZFYVE28Q9HCC9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms