Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 AC140658.5-201ENST00000438532 169 ntBASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 AC087163.2-201ENST00000457299 853 ntBASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 KRT8P48-201ENST00000515599 1220 ntBASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 FAM86C2P-203ENST00000528684 1004 ntBASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.09■□□□□ 0.97
RTFDC1Q9BY42 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 AC092474.2-201ENST00000424288 719 ntBASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 AL671277.1-201ENST00000429656 993 ntBASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 TIMM8BP1-201ENST00000452384 211 ntBASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 AC067863.1-201ENST00000494933 530 ntBASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 AJ011932.1-201ENST00000621707 465 ntBASIC21.08■□□□□ 0.97
RTFDC1Q9BY42 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTFDC1Q9BY42 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTFDC1Q9BY42 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RTFDC1Q9BY42 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 AL512356.2-201ENST00000546955 174 ntBASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 Z92544.3-201ENST00000624747 417 ntBASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RTFDC1Q9BY42 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 KRT18P55-202ENST00000578578 1546 ntBASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 DUX4L27-201ENST00000554796 1261 ntBASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 AL645728.2-201ENST00000641974 660 ntBASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RTFDC1Q9BY42 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms