Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22.99■■□□□ 1.27
ABCA3Q99758 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.99■■□□□ 1.27
ABCA3Q99758 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC22.99■■□□□ 1.27
ABCA3Q99758 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
ABCA3Q99758 U1.21-201ENST00000580816 167 ntBASIC22.99■■□□□ 1.27
ABCA3Q99758 AL132655.2-201ENST00000596276 594 ntBASIC22.99■■□□□ 1.27
ABCA3Q99758 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
ABCA3Q99758 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.99■■□□□ 1.27
ABCA3Q99758 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 AC022494.1-201ENST00000466044 728 ntBASIC22.99■■□□□ 1.27
ABCA3Q99758 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC22.99■■□□□ 1.27
ABCA3Q99758 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
ABCA3Q99758 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC22.99■■□□□ 1.27
ABCA3Q99758 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ABCA3Q99758 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
ABCA3Q99758 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ABCA3Q99758 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
ABCA3Q99758 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.98■■□□□ 1.27
ABCA3Q99758 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCA3Q99758 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCA3Q99758 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ABCA3Q99758 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
ABCA3Q99758 AL606495.2-201ENST00000605867 535 ntBASIC22.98■■□□□ 1.27
ABCA3Q99758 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC22.98■■□□□ 1.27
ABCA3Q99758 AC004840.1-201ENST00000636359 365 ntBASIC22.98■■□□□ 1.27
ABCA3Q99758 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
ABCA3Q99758 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ABCA3Q99758 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.97■■□□□ 1.27
ABCA3Q99758 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCA3Q99758 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC22.97■■□□□ 1.27
ABCA3Q99758 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCA3Q99758 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC22.97■■□□□ 1.27
ABCA3Q99758 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
ABCA3Q99758 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.97■■□□□ 1.27
ABCA3Q99758 SPTLC1P1-201ENST00000447199 261 ntBASIC22.97■■□□□ 1.27
ABCA3Q99758 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC22.97■■□□□ 1.27
ABCA3Q99758 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC22.97■■□□□ 1.27
ABCA3Q99758 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCA3Q99758 AP000997.3-201ENST00000623333 2250 ntBASIC22.97■■□□□ 1.27
ABCA3Q99758 CU639417.3-201ENST00000624240 1404 ntBASIC22.97■■□□□ 1.27
ABCA3Q99758 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCA3Q99758 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCA3Q99758 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ABCA3Q99758 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ABCA3Q99758 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
ABCA3Q99758 AC079776.1-201ENST00000401540 1152 ntBASIC22.96■■□□□ 1.27
ABCA3Q99758 PIN1P1-201ENST00000412108 996 ntBASIC22.96■■□□□ 1.27
ABCA3Q99758 AL590560.3-201ENST00000623350 461 ntBASIC22.96■■□□□ 1.27
ABCA3Q99758 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC22.96■■□□□ 1.27
ABCA3Q99758 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
ABCA3Q99758 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.96■■□□□ 1.27
ABCA3Q99758 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.96■■□□□ 1.27
ABCA3Q99758 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.96■■□□□ 1.27
ABCA3Q99758 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.96■■□□□ 1.27
ABCA3Q99758 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC22.96■■□□□ 1.27
ABCA3Q99758 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
ABCA3Q99758 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
ABCA3Q99758 HILS1-202ENST00000545329 423 ntBASIC22.96■■□□□ 1.27
ABCA3Q99758 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC22.96■■□□□ 1.27
ABCA3Q99758 AC008267.7-201ENST00000624570 1194 ntBASIC22.96■■□□□ 1.27
ABCA3Q99758 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ABCA3Q99758 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
ABCA3Q99758 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ABCA3Q99758 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ABCA3Q99758 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ABCA3Q99758 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ABCA3Q99758 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC22.95■■□□□ 1.26
ABCA3Q99758 FOXO1B-201ENST00000504678 1527 ntBASIC22.95■■□□□ 1.26
ABCA3Q99758 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC22.95■■□□□ 1.26
ABCA3Q99758 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
ABCA3Q99758 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC22.95■■□□□ 1.26
ABCA3Q99758 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC22.95■■□□□ 1.26
ABCA3Q99758 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC22.95■■□□□ 1.26
ABCA3Q99758 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC22.95■■□□□ 1.26
ABCA3Q99758 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC22.95■■□□□ 1.26
ABCA3Q99758 AL138828.2-201ENST00000615812 383 ntBASIC22.95■■□□□ 1.26
ABCA3Q99758 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
ABCA3Q99758 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ABCA3Q99758 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.95■■□□□ 1.26
ABCA3Q99758 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.95■■□□□ 1.26
ABCA3Q99758 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.94■■□□□ 1.26
ABCA3Q99758 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
ABCA3Q99758 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms