Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
EYA3Q99504 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
EYA3Q99504 WDR53-203ENST00000429115 683 ntTSL 2 BASIC21.12■□□□□ 0.97
EYA3Q99504 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.12■□□□□ 0.97
EYA3Q99504 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.12■□□□□ 0.97
EYA3Q99504 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.12■□□□□ 0.97
EYA3Q99504 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.12■□□□□ 0.97
EYA3Q99504 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 KRT18P55-202ENST00000578578 1546 ntBASIC21.12■□□□□ 0.97
EYA3Q99504 AP000997.3-201ENST00000623333 2250 ntBASIC21.12■□□□□ 0.97
EYA3Q99504 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EYA3Q99504 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.12■□□□□ 0.97
EYA3Q99504 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
EYA3Q99504 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.11■□□□□ 0.97
EYA3Q99504 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.11■□□□□ 0.97
EYA3Q99504 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.11■□□□□ 0.97
EYA3Q99504 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.11■□□□□ 0.97
EYA3Q99504 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
EYA3Q99504 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 HLA-J-203ENST00000494367 1087 ntBASIC21.11■□□□□ 0.97
EYA3Q99504 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.11■□□□□ 0.97
EYA3Q99504 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.11■□□□□ 0.97
EYA3Q99504 SPCS2P1-201ENST00000561636 679 ntBASIC21.11■□□□□ 0.97
EYA3Q99504 AC025678.2-201ENST00000562061 970 ntBASIC21.11■□□□□ 0.97
EYA3Q99504 AC022145.2-201ENST00000598203 171 ntBASIC21.11■□□□□ 0.97
EYA3Q99504 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.11■□□□□ 0.97
EYA3Q99504 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.11■□□□□ 0.97
EYA3Q99504 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
EYA3Q99504 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.1■□□□□ 0.97
EYA3Q99504 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
EYA3Q99504 AC006116.8-202ENST00000587620 1550 ntBASIC21.1■□□□□ 0.97
EYA3Q99504 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
EYA3Q99504 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC21.1■□□□□ 0.97
EYA3Q99504 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.1■□□□□ 0.97
EYA3Q99504 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 AC090164.3-201ENST00000610780 2143 ntBASIC21.1■□□□□ 0.97
EYA3Q99504 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
EYA3Q99504 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 PAWRP1-201ENST00000451083 565 ntBASIC21.1■□□□□ 0.97
EYA3Q99504 ACTL9-202ENST00000612068 1252 ntBASIC21.1■□□□□ 0.97
EYA3Q99504 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
EYA3Q99504 AC046185.3-201ENST00000623228 1824 ntBASIC21.1■□□□□ 0.97
EYA3Q99504 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
EYA3Q99504 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.1■□□□□ 0.97
EYA3Q99504 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.1■□□□□ 0.97
EYA3Q99504 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.1■□□□□ 0.97
EYA3Q99504 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
EYA3Q99504 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
EYA3Q99504 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.09■□□□□ 0.97
EYA3Q99504 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.09■□□□□ 0.97
EYA3Q99504 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.09■□□□□ 0.97
EYA3Q99504 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.09■□□□□ 0.97
EYA3Q99504 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.09■□□□□ 0.97
EYA3Q99504 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.09■□□□□ 0.97
EYA3Q99504 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
EYA3Q99504 AC023141.5-201ENST00000458585 616 ntBASIC21.09■□□□□ 0.97
EYA3Q99504 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.09■□□□□ 0.97
EYA3Q99504 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.09■□□□□ 0.97
EYA3Q99504 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 AC104581.1-202ENST00000635932 2618 ntBASIC21.09■□□□□ 0.97
EYA3Q99504 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.09■□□□□ 0.97
EYA3Q99504 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.09■□□□□ 0.97
EYA3Q99504 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
EYA3Q99504 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.09■□□□□ 0.97
EYA3Q99504 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.09■□□□□ 0.97
EYA3Q99504 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.09■□□□□ 0.97
EYA3Q99504 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
EYA3Q99504 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms