Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 AC009336.1-201ENST00000608941 1553 ntBASIC18.11■□□□□ 0.49
HAPLN3Q96S86 AC079776.2-201ENST00000641154 1609 ntBASIC18.11■□□□□ 0.49
HAPLN3Q96S86 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HAPLN3Q96S86 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AL020989.1-201ENST00000422979 469 ntBASIC18.1■□□□□ 0.49
HAPLN3Q96S86 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AF238378.1-201ENST00000526806 358 ntBASIC18.1■□□□□ 0.49
HAPLN3Q96S86 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AC008608.2-201ENST00000606089 416 ntBASIC18.1■□□□□ 0.49
HAPLN3Q96S86 AL691432.3-201ENST00000621860 400 ntBASIC18.1■□□□□ 0.49
HAPLN3Q96S86 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
HAPLN3Q96S86 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.09■□□□□ 0.49
HAPLN3Q96S86 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 FGFR3P6-201ENST00000457012 610 ntBASIC18.09■□□□□ 0.49
HAPLN3Q96S86 EMBP1-201ENST00000458200 901 ntBASIC18.09■□□□□ 0.49
HAPLN3Q96S86 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 RN7SL510P-201ENST00000581311 263 ntBASIC18.09■□□□□ 0.49
HAPLN3Q96S86 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
HAPLN3Q96S86 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
HAPLN3Q96S86 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms