Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 AC023274.1-201ENST00000418278 595 ntBASIC20.33■□□□□ 0.85
CCDC17Q96LX7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 MTDHP5-201ENST00000598980 586 ntBASIC20.33■□□□□ 0.85
CCDC17Q96LX7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.33■□□□□ 0.85
CCDC17Q96LX7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC17Q96LX7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 AC002310.6-201ENST00000624451 1377 ntBASIC20.33■□□□□ 0.84
CCDC17Q96LX7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC17Q96LX7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 AC133963.1-201ENST00000504166 1679 ntBASIC20.32■□□□□ 0.84
CCDC17Q96LX7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 RPSAP43-201ENST00000402237 625 ntBASIC20.32■□□□□ 0.84
CCDC17Q96LX7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 GPX1P2-201ENST00000429271 606 ntBASIC20.32■□□□□ 0.84
CCDC17Q96LX7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 AL390961.4-201ENST00000623958 2535 ntBASIC20.32■□□□□ 0.84
CCDC17Q96LX7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC17Q96LX7 LYSMD4-203ENST00000378904 2122 ntBASIC20.32■□□□□ 0.84
CCDC17Q96LX7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 MCCD1P2-201ENST00000423228 335 ntBASIC20.31■□□□□ 0.84
CCDC17Q96LX7 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 OR7E47P-204ENST00000575924 449 ntBASIC20.31■□□□□ 0.84
CCDC17Q96LX7 MIR3687-2-201ENST00000577708 61 ntBASIC20.31■□□□□ 0.84
CCDC17Q96LX7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 MIR3687-1-201ENST00000614492 61 ntBASIC20.31■□□□□ 0.84
CCDC17Q96LX7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC17Q96LX7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 IGLL3P-201ENST00000412472 434 ntBASIC20.3■□□□□ 0.84
CCDC17Q96LX7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 AC112482.1-201ENST00000492080 688 ntBASIC20.3■□□□□ 0.84
CCDC17Q96LX7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 AC096734.2-201ENST00000562054 433 ntBASIC20.3■□□□□ 0.84
CCDC17Q96LX7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CCDC17Q96LX7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms