Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 BICD1-207ENST00000551848 1962 ntBASIC14.69□□□□□ -0.06
TIMD4Q96H15 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 AL589182.2-201ENST00000619332 1049 ntBASIC14.69□□□□□ -0.06
TIMD4Q96H15 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 PGM5P2-202ENST00000637225 1043 ntBASIC14.69□□□□□ -0.06
TIMD4Q96H15 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
TIMD4Q96H15 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TIMD4Q96H15 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 NCF1C-201ENST00000438382 1427 ntBASIC14.68□□□□□ -0.06
TIMD4Q96H15 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 AC092910.1-201ENST00000482027 1129 ntBASIC14.68□□□□□ -0.06
TIMD4Q96H15 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 STK25P1-201ENST00000585406 838 ntBASIC14.68□□□□□ -0.06
TIMD4Q96H15 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 AC019129.2-201ENST00000609837 1235 ntBASIC14.68□□□□□ -0.06
TIMD4Q96H15 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 MIR7706-201ENST00000613747 67 ntBASIC14.68□□□□□ -0.06
TIMD4Q96H15 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 FER1L4-210ENST00000615531 5998 ntBASIC14.68□□□□□ -0.06
TIMD4Q96H15 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.68□□□□□ -0.06
TIMD4Q96H15 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TIMD4Q96H15 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TIMD4Q96H15 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms