Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 TMEM191A-211ENST00000637163 1067 ntBASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 OR6D1P-203ENST00000641209 4860 ntBASIC17.41■□□□□ 0.38
CKAP2Q8WWK9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 ESRRAP1-201ENST00000400596 1257 ntBASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 AC113404.2-201ENST00000507884 177 ntBASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 AC073648.6-201ENST00000641589 218 ntBASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 MST1L-201ENST00000442552 2185 ntBASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CKAP2Q8WWK9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CKAP2Q8WWK9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CKAP2Q8WWK9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
CKAP2Q8WWK9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 AC105917.1-201ENST00000506637 2539 ntBASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 SEC1P-202ENST00000473944 940 ntBASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 CD177P1-201ENST00000606252 935 ntBASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CKAP2Q8WWK9 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CKAP2Q8WWK9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms