Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC116353.5-201ENST00000638148 1699 ntBASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 AC114341.1-201ENST00000618070 349 ntBASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 TP73-AS1-210ENST00000637775 1455 ntBASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 AC004870.1-201ENST00000315132 882 ntBASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 SLC25A1P3-201ENST00000395415 828 ntBASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SMARCC2Q8TAQ2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 AC009053.2-201ENST00000563701 2365 ntBASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMARCC2Q8TAQ2 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
SMARCC2Q8TAQ2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMARCC2Q8TAQ2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms