Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 AC012645.4-201ENST00000610691 1061 ntBASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 AL049757.1-201ENST00000616842 1596 ntBASIC16.47■□□□□ 0.23
SNIP1Q8TAD8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 AL499627.1-201ENST00000569373 2188 ntBASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 AL390955.2-201ENST00000603032 514 ntBASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 AC020763.4-201ENST00000623414 4170 ntBASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
SNIP1Q8TAD8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SNIP1Q8TAD8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
SNIP1Q8TAD8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 PTCHD3P3-201ENST00000403073 906 ntBASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 AC093520.2-201ENST00000561830 333 ntBASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 AL049812.1-201ENST00000432563 2267 ntBASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SNIP1Q8TAD8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 PKD1P1-201ENST00000458669 6805 ntBASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 GMCL1P1-201ENST00000463439 1581 ntBASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.44■□□□□ 0.22
SNIP1Q8TAD8 GK-202ENST00000378941 458 ntTSL 3 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms