Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 IL10RB-AS1-201ENST00000411998 2228 ntTSL 2 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 RANBP3-202ENST00000340578 3233 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 NDST2-207ENST00000639645 2448 ntTSL 5 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 PRMT2-205ENST00000397637 2880 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 MYO15B-237ENST00000642007 4893 ntBASIC10.85□□□□□ -0.67
SVIPQ8NHG7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 SLC4A5-204ENST00000377634 3814 ntAPPRIS P4 TSL 5 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 FCGR3A-202ENST00000367969 2385 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 ALDH1A3-203ENST00000557963 1670 ntBASIC10.85□□□□□ -0.67
SVIPQ8NHG7 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 AL590552.1-201ENST00000623164 1770 ntBASIC10.85□□□□□ -0.67
SVIPQ8NHG7 ZNF221-201ENST00000251269 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 EBF2-201ENST00000408929 1888 ntTSL 2 BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 AL591122.2-201ENST00000624125 1853 ntBASIC10.85□□□□□ -0.67
SVIPQ8NHG7 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SVIPQ8NHG7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 AL078604.2-201ENST00000430078 2002 ntTSL 2 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 AC027682.7-201ENST00000623147 2121 ntBASIC10.84□□□□□ -0.67
SVIPQ8NHG7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 C3AR1-201ENST00000307637 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 KCTD1-206ENST00000579973 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 AC092068.2-201ENST00000590491 1708 ntBASIC10.84□□□□□ -0.67
SVIPQ8NHG7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.84□□□□□ -0.67
SVIPQ8NHG7 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 NTM-221ENST00000539799 2550 ntTSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 TTC8-205ENST00000358622 2297 ntTSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SVIPQ8NHG7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms