Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CARMIL3Q8ND23 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 ACTL9-202ENST00000612068 1252 ntBASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CARMIL3Q8ND23 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 FAM185BP-201ENST00000443595 716 ntBASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 IGHV3OR16-6-201ENST00000568775 360 ntBASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CARMIL3Q8ND23 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 AC112191.1-201ENST00000523689 701 ntBASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 AC025678.2-201ENST00000562061 970 ntBASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 AL513480.1-201ENST00000451731 511 ntBASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 LINC00628-201ENST00000628516 1289 ntBASIC21.74■■□□□ 1.07
CARMIL3Q8ND23 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CARMIL3Q8ND23 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms