Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM42Q8IWZ5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 AC116353.5-201ENST00000638148 1699 ntBASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 CCR12P-201ENST00000446203 998 ntBASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM42Q8IWZ5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 BX276092.7-203ENST00000637198 1536 ntBASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 AC113404.2-201ENST00000507884 177 ntBASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 LYSMD4-203ENST00000378904 2122 ntBASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM42Q8IWZ5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 LINC01311-201ENST00000565162 1445 ntBASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 UBALD1-205ENST00000590891 2641 ntBASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 KRT18P65-201ENST00000439811 1286 ntBASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRIM42Q8IWZ5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms